Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
paaAphenylacetate-CoA oxygenase subunit PaaA. (313 aa)    
Predicted Functional Partners:
C481_07431
phenylacetate-CoA oxygenase subunit PaaI.
 
  
 
0.999
C481_07426
Phenylacetic acid degradation B; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
 
  
  0.995
C481_07411
Thioesterase superfamily protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
 
 0.983
C481_07446
phenylacetate-CoA ligase; COG1541 Coenzyme F390 synthetase.
 
 
 0.956
C481_07436
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
 
 0.955
C481_07386
phenylacetate--CoA ligase; COG1541 Coenzyme F390 synthetase.
 
 
 0.922
C481_05500
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.910
C481_07441
Hypothetical protein; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
     0.904
C481_07451
Thioesterase superfamily protein; COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
 
 
 0.695
C481_19400
COG0633 Ferredoxin.
 
 0.669
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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