Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C481_07536PAS sensor protein; COG2202 FOG: PAS/PAC domain. (1085 aa)    
Predicted Functional Partners:
C481_19795
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
    
 0.787
C481_07531
Hypothetical protein.
       0.712
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
    
 0.682
C481_08111
Hypothetical protein; COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
  
  
 0.673
C481_20861
Hypothetical protein; COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
  
  
 0.664
gap
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
   
 
 0.659
C481_12429
Bacterio-opsin activator HTH domain-containing protein; COG3413 Predicted DNA binding protein.
  
     0.654
C481_13059
Hypothetical protein.
  
     0.654
C481_12314
Hypothetical protein; COG1340 Uncharacterized archaeal coiled-coil protein.
  
  
  0.628
C481_20436
Hypothetical protein; COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system.
  
     0.608
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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