STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_07676COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (385 aa)    
Predicted Functional Partners:
C481_15080
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.818
C481_00300
FAD-linked oxidase domain-containing protein; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.750
C481_02657
FAD-linked oxidase domain protein; COG0277 FAD/FMN-containing dehydrogenases.
     
 0.750
C481_16085
COG0277 FAD/FMN-containing dehydrogenases.
     
 0.750
C481_05365
COG2421 Predicted acetamidase/formamidase.
  
  
  0.684
C481_20706
COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
  
 
0.642
C481_07641
Zinc-binding dehydrogenase oxidoreductase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
  
 
0.588
C481_15860
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.583
C481_07671
Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake.
  
    0.578
C481_08371
Glycosyl hydrolase family 32 domain protein; COG1621 Beta-fructosidases (levanase/invertase).
  
  
 0.533
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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