Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_07676COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (385 aa)    
Predicted Functional Partners:
C481_05365
COG2421 Predicted acetamidase/formamidase.
  
  
  0.846
C481_01400
Formate dehydrogenase subunit alpha; COG3383 Uncharacterized anaerobic dehydrogenase.
     
  0.843
C481_13734
Formate dehydrogenase subunit alpha; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
     
  0.843
C481_15080
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 
 0.839
C481_14763
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
     
  0.819
C481_20706
COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
  
 
0.639
C481_07611
4Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1.
     
  0.586
C481_10660
4Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1.
     
  0.586
C481_07671
Phosphate uptake regulator PhoU; Plays a role in the regulation of phosphate uptake.
  
    0.579
C481_07641
Zinc-binding dehydrogenase oxidoreductase; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
     
  0.539
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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