Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_07776COG2820 Uridine phosphorylase. (273 aa)    
Predicted Functional Partners:
C481_07786
COG0295 Cytidine deaminase.
 
 
 0.987
C481_04636
COG0572 Uridine kinase.
    
 0.911
C481_17657
COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
 
  
  0.903
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
     
 0.901
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.891
C481_09677
COG1011 Predicted hydrolase (HAD superfamily).
     
 0.870
C481_16557
Haloacid dehalogenase; COG0546 Predicted phosphatases.
     
 0.870
C481_20201
Metallophosphoesterase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
    
  0.819
C481_03082
COG0647 Predicted sugar phosphatases of the HAD superfamily.
     
  0.712
C481_15785
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
 
 0.701
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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