Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
C481_08046Hypothetical protein; COG0640 Predicted transcriptional regulators. (181 aa)    
Predicted Functional Partners:
C481_08051
Subtilase family protease; COG1404 Subtilisin-like serine proteases.
 
     0.600
cetZ-3
Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family.
  
     0.591
C481_16917
Hypothetical protein; COG0433 Predicted ATPase.
  
     0.581
C481_12314
Hypothetical protein; COG1340 Uncharacterized archaeal coiled-coil protein.
  
     0.580
C481_16246
ATPase AAA; COG2874 Predicted ATPases involved in biogenesis of archaeal flagella.
  
     0.573
cetZ-4
Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family.
  
     0.551
C481_16261
COG1955 Archaeal flagella assembly protein J.
  
     0.539
C481_17122
COG1202 Superfamily II helicase, archaea-specific.
  
     0.528
C481_18325
COG0582 Integrase.
  
     0.526
C481_16251
COG3352 Putative archaeal flagellar protein C.
  
     0.517
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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