STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_08051Subtilase family protease; COG1404 Subtilisin-like serine proteases. (427 aa)    
Predicted Functional Partners:
C481_08046
Hypothetical protein; COG0640 Predicted transcriptional regulators.
 
     0.600
C481_14748
Hypothetical protein.
  
     0.594
C481_10420
Mur ligase family CapB protein; COG0769 UDP-N-acetylmuramyl tripeptide synthase.
  
     0.518
C481_14773
Anaerobic dehydrogenase-like protein; COG3381 Uncharacterized component of anaerobic dehydrogenases.
  
     0.467
C481_14768
Methyl-viologen-reducing hydrogenase subunit delta; COG1148 Heterodisulfide reductase, subunit A and related polyferredoxins.
  
     0.452
C481_19680
Hypothetical protein.
  
     0.441
C481_20061
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.436
C481_08056
Hypothetical protein.
       0.427
C481_11275
Hypothetical protein.
  
     0.412
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.