Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_08081XRE family transcriptional regulator; COG1813 Predicted transcription factor, homolog of eukaryotic MBF1. (98 aa)    
Predicted Functional Partners:
rpl29
COG0255 Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
 
 0.921
rpl18e
COG1727 Ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family.
  
   0.911
rpl40e
COG1552 Ribosomal protein L40E; Belongs to the eukaryotic ribosomal protein eL40 family.
  
   0.907
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
    0.898
rpl21e
COG2139 Ribosomal protein L21E; Belongs to the eukaryotic ribosomal protein eL21 family.
  
   0.888
rps3ae
COG1890 Ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
  
   0.881
rps28e
COG2053 Ribosomal protein S28E/S33; Belongs to the eukaryotic ribosomal protein eS28 family.
  
   0.880
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA.
  
   0.879
rps17E
COG1383 Ribosomal protein S17E; Belongs to the eukaryotic ribosomal protein eS17 family.
  
   0.871
rpl24e
50S ribosomal protein L24E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL24 family.
   
   0.863
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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