STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_08136Deacylase-like protein; COG3608 Predicted deacylase. (296 aa)    
Predicted Functional Partners:
C481_08141
Hypothetical protein.
       0.792
C481_12774
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
  
     0.705
C481_15990
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
  
     0.702
C481_04646
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
  
     0.675
C481_20656
Succinylglutamate desuccinylase/aspartoacylase; COG3608 Predicted deacylase.
  
     0.674
C481_17457
RimK domain protein ATP-grasp; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
 
     0.554
C481_08146
Hypothetical protein.
       0.511
C481_08131
ThiJ/PfpI domain-containing protein; COG0693 Putative intracellular protease/amidase.
       0.507
C481_12789
RimK family alpha-L-glutamate ligase; COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
 
     0.495
C481_11540
COG0726 Predicted xylanase/chitin deacetylase.
  
     0.440
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.