Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C481_08256Citrate synthase; COG0640 Predicted transcriptional regulators. (116 aa)    
Predicted Functional Partners:
C481_07726
COG0281 Malic enzyme.
     
  0.818
C481_08261
Peptidase S9 prolyl oligopeptidase active site domain-containing protein; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases.
       0.563
C481_08246
Branched-chain amino acid transport; COG4541 Predicted membrane protein.
       0.508
C481_08251
AzlC family protein; COG1296 Predicted branched-chain amino acid permease (azaleucine resistance).
       0.508
C481_08266
N-acetyltransferase GCN5; COG1246 N-acetylglutamate synthase and related acetyltransferases.
       0.407
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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