Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_08346FAD linked oxidase; COG0277 FAD/FMN-containing dehydrogenases. (466 aa)    
Predicted Functional Partners:
C481_05965
Pyruvate carboxyltransferase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
  
  
 0.901
C481_07621
(R)-citramalate synthase; COG0119 Isopropylmalate/homocitrate/citramalate synthases; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
  
 0.901
C481_14663
Thiamine pyrophosphate domain-containing TPP-binding protein; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
   
  0.899
C481_07466
Thiamine pyrophosphate protein central region; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
   
  0.898
C481_15080
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.896
C481_10220
COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
  
 
  0.890
C481_04711
Beta-lactamase; COG0491 Zn-dependent hydrolases, including glyoxylases.
     
 0.887
C481_06582
Beta-lactamase; COG0491 Zn-dependent hydrolases, including glyoxylases.
     
 0.887
C481_05935
COG0066 3-isopropylmalate dehydratase small subunit.
     
  0.886
leuC
Isopropylmalate isomerase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
     
  0.886
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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