Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_09008Xylose isomerase; COG1082 Sugar phosphate isomerases/epimerases. (276 aa)    
Predicted Functional Partners:
C481_09013
TatD-related deoxyribonuclease; COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold.
 
  
 0.946
C481_09003
UbiA prenyltransferase.
 
     0.943
C481_09018
COG1260 Myo-inositol-1-phosphate synthase.
 
     0.804
C481_09023
Type I phosphodiesterase/nucleotide pyrophosphatase; COG1524 Uncharacterized proteins of the AP superfamily.
 
   
 0.797
C481_07151
Oxidoreductase domain-containing protein; COG0673 Predicted dehydrogenases and related proteins.
 
 
  0.546
C481_08998
Xylose isomerase; COG1082 Sugar phosphate isomerases/epimerases.
 
    
0.534
C481_10935
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
 
 0.479
C481_13959
ROK family protein; COG1940 Transcriptional regulator/sugar kinase.
 
  
 0.476
C481_15785
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
 
 0.456
C481_04983
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
 
 0.452
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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