Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C481_09018 | C481_09023 | COG1260 Myo-inositol-1-phosphate synthase. | Type I phosphodiesterase/nucleotide pyrophosphatase; COG1524 Uncharacterized proteins of the AP superfamily. | 0.914 |
C481_09018 | C481_09028 | COG1260 Myo-inositol-1-phosphate synthase. | Hypothetical protein. | 0.401 |
C481_09023 | C481_09018 | Type I phosphodiesterase/nucleotide pyrophosphatase; COG1524 Uncharacterized proteins of the AP superfamily. | COG1260 Myo-inositol-1-phosphate synthase. | 0.914 |
C481_09023 | C481_09028 | Type I phosphodiesterase/nucleotide pyrophosphatase; COG1524 Uncharacterized proteins of the AP superfamily. | Hypothetical protein. | 0.401 |
C481_09028 | C481_09018 | Hypothetical protein. | COG1260 Myo-inositol-1-phosphate synthase. | 0.401 |
C481_09028 | C481_09023 | Hypothetical protein. | Type I phosphodiesterase/nucleotide pyrophosphatase; COG1524 Uncharacterized proteins of the AP superfamily. | 0.401 |
C481_09028 | C481_09033 | Hypothetical protein. | Hypothetical protein. | 0.416 |
C481_09028 | C481_09038 | Hypothetical protein. | PQQ-dependent enzyme-like protein; COG4993 Glucose dehydrogenase. | 0.416 |
C481_09033 | C481_09028 | Hypothetical protein. | Hypothetical protein. | 0.416 |
C481_09033 | C481_09038 | Hypothetical protein. | PQQ-dependent enzyme-like protein; COG4993 Glucose dehydrogenase. | 0.773 |
C481_09038 | C481_09028 | PQQ-dependent enzyme-like protein; COG4993 Glucose dehydrogenase. | Hypothetical protein. | 0.416 |
C481_09038 | C481_09033 | PQQ-dependent enzyme-like protein; COG4993 Glucose dehydrogenase. | Hypothetical protein. | 0.773 |