Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_09228TrkA-N domain-containing protein; COG0569 K+ transport systems, NAD-binding component. (223 aa)    
Predicted Functional Partners:
C481_09223
Trk system potassium uptake protein TrkH; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.979
C481_09238
Cation transporter; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.932
C481_12594
Cation transporter; COG0168 Trk-type K+ transport systems, membrane components.
 
 
 0.906
C481_08888
TrkA-N domain-containing protein; COG0569 K+ transport systems, NAD-binding component.
  
     0.719
aroA-2
Fructose-bisphosphate aldolase; Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2-amino-3,7- dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids.
   
    0.682
C481_04006
Bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoaE; COG0314 Molybdopterin converting factor, large subunit.
   
    0.650
hemD
COG1587 Uroporphyrinogen-III synthase.
  
    0.650
C481_12879
Sodium/hydrogen exchanger; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
     
 0.590
C481_01747
COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase].
   
    0.569
C481_09218
COG1522 Transcriptional regulators.
  
   
0.529
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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