Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_09337Binding-protein-dependent transport system inner membrane protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I; overlaps another CDS with the same product name. (309 aa)    
Predicted Functional Partners:
C481_09332
Binding-protein-dependent transport system inner membrane protein; COG1177 ABC-type spermidine/putrescine transport system, permease component II; overlaps another CDS with the same product name.
 
0.999
C481_09347
Family 1 extracellular solute-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 
 0.991
C481_09342
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
  0.986
C481_06587
Polyamine-transporting ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
  0.943
C481_19195
Family 1 extracellular solute-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
 
 0.919
C481_19190
COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
  
  0.829
C481_01060
Binding-protein-dependent transport systems inner membrane component; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
 
  0.811
C481_01055
ABC transporter-related protein; COG3839 ABC-type sugar transport systems, ATPase components.
 
  
  0.782
C481_00555
COG3839 ABC-type sugar transport systems, ATPase components.
 
  
  0.648
C481_00480
Sugar ABC transporter ATP-binding protein; COG3839 ABC-type sugar transport systems, ATPase components.
 
  
  0.643
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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