STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_09367Type I phosphodiesterase/nucleotide pyrophosphatase. (447 aa)    
Predicted Functional Partners:
C481_09362
COG2090 Uncharacterized protein conserved in archaea.
 
     0.623
C481_09862
COG3119 Arylsulfatase A and related enzymes.
 
     0.583
C481_01632
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
     0.501
C481_05605
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
     0.499
C481_15985
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
     0.462
C481_04286
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
     0.459
C481_02582
Sulfate adenylyltransferase subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
     0.455
C481_09372
Hydrolase.
       0.453
C481_09357
Hypothetical protein.
       0.445
C481_09377
COG0221 Inorganic pyrophosphatase.
       0.428
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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