Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C481_11275Hypothetical protein. (264 aa)    
Predicted Functional Partners:
C481_11280
Hypothetical protein.
       0.955
C481_11270
Hypothetical protein; COG3411 Ferredoxin.
       0.902
C481_19680
Hypothetical protein.
  
     0.679
C481_11625
COG3413 Predicted DNA binding protein.
  
     0.628
C481_10420
Mur ligase family CapB protein; COG0769 UDP-N-acetylmuramyl tripeptide synthase.
  
     0.600
C481_11265
COG0167 Dihydroorotate dehydrogenase.
       0.563
C481_14748
Hypothetical protein.
  
     0.533
C481_20641
COG3316 Transposase and inactivated derivatives.
  
     0.497
C481_16987
Hypothetical protein; COG3211 Predicted phosphatase.
  
     0.496
C481_11285
COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit.
       0.481
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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