Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_11490Type I phosphodiesterase/nucleotide pyrophosphatase. (577 aa)    
Predicted Functional Partners:
C481_09862
COG3119 Arylsulfatase A and related enzymes.
 
     0.558
C481_11495
Bacterio-opsin activator HTH domain-containing protein; COG3413 Predicted DNA binding protein.
       0.477
C481_01632
Sulfatase; COG3119 Arylsulfatase A and related enzymes.
 
     0.469
C481_19896
Integrase family protein; COG0582 Integrase.
  
     0.469
C481_20566
Integrase family protein; COG0582 Integrase.
  
     0.446
C481_05205
COG1033 Predicted exporters of the RND superfamily.
  
     0.440
C481_03267
Integrase family protein; COG0582 Integrase.
  
     0.439
C481_11345
COG2348 Uncharacterized protein involved in methicillin resistance.
 
     0.433
C481_11370
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.431
C481_11485
Formate/nitrite transporter; COG1651 Protein-disulfide isomerase.
       0.418
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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