STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_11595COG1817 Uncharacterized protein conserved in archaea. (355 aa)    
Predicted Functional Partners:
C481_11590
COG0438 Glycosyltransferase.
 
     0.842
C481_11415
Hypothetical protein.
 
     0.626
C481_06721
COG0438 Glycosyltransferase.
 
     0.611
C481_13234
COG0438 Glycosyltransferase.
 
     0.599
C481_13129
Hypothetical protein.
 
     0.595
C481_11345
COG2348 Uncharacterized protein involved in methicillin resistance.
 
     0.576
C481_11600
Nucleotide sugar dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
     
 0.494
C481_13244
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
   
 0.433
C481_16070
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.431
C481_11515
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
   
 0.429
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.