Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C481_05295 | C481_06362 | COG1522 Transcriptional regulators. | Adenosylcobinamide amidohydrolase. | 0.451 |
C481_05295 | C481_12349 | COG1522 Transcriptional regulators. | Hypothetical protein. | 0.424 |
C481_05295 | C481_12849 | COG1522 Transcriptional regulators. | Cupin 2 conserved barrel domain protein; COG0662 Mannose-6-phosphate isomerase. | 0.473 |
C481_05350 | C481_12849 | Hypothetical protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily. | Cupin 2 conserved barrel domain protein; COG0662 Mannose-6-phosphate isomerase. | 0.508 |
C481_06362 | C481_05295 | Adenosylcobinamide amidohydrolase. | COG1522 Transcriptional regulators. | 0.451 |
C481_06362 | C481_06392 | Adenosylcobinamide amidohydrolase. | Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily). | 0.797 |
C481_06362 | C481_06656 | Adenosylcobinamide amidohydrolase. | Hypothetical protein. | 0.443 |
C481_06362 | C481_12349 | Adenosylcobinamide amidohydrolase. | Hypothetical protein. | 0.713 |
C481_06362 | C481_12849 | Adenosylcobinamide amidohydrolase. | Cupin 2 conserved barrel domain protein; COG0662 Mannose-6-phosphate isomerase. | 0.576 |
C481_06362 | C481_18325 | Adenosylcobinamide amidohydrolase. | COG0582 Integrase. | 0.455 |
C481_06362 | C481_18460 | Adenosylcobinamide amidohydrolase. | Nitrogen specific signal transduction histidine kinase NtrB; COG2203 FOG: GAF domain. | 0.537 |
C481_06392 | C481_06362 | Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily). | Adenosylcobinamide amidohydrolase. | 0.797 |
C481_06392 | C481_06656 | Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily). | Hypothetical protein. | 0.427 |
C481_06392 | C481_12849 | Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily). | Cupin 2 conserved barrel domain protein; COG0662 Mannose-6-phosphate isomerase. | 0.519 |
C481_06392 | C481_14503 | Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily). | Integrase family protein; COG0582 Integrase. | 0.646 |
C481_06392 | C481_18325 | Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily). | COG0582 Integrase. | 0.658 |
C481_06656 | C481_06362 | Hypothetical protein. | Adenosylcobinamide amidohydrolase. | 0.443 |
C481_06656 | C481_06392 | Hypothetical protein. | Haloacid dehalogenase; COG1011 Predicted hydrolase (HAD superfamily). | 0.427 |
C481_06656 | C481_12849 | Hypothetical protein. | Cupin 2 conserved barrel domain protein; COG0662 Mannose-6-phosphate isomerase. | 0.638 |
C481_06656 | C481_18460 | Hypothetical protein. | Nitrogen specific signal transduction histidine kinase NtrB; COG2203 FOG: GAF domain. | 0.490 |
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