Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C481_12964COG2070 Dioxygenases related to 2-nitropropane dioxygenase. (381 aa)    
Predicted Functional Partners:
C481_19615
Major facilitator superfamily protein; COG2223 Nitrate/nitrite transporter.
 
  
 0.922
C481_17830
Nitrite and sulfite reductase 4Fe-4S region; COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
  
  0.901
C481_17835
Nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
     
  0.886
C481_03537
COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
  
  0.842
C481_02367
COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
  
  0.838
C481_08111
Hypothetical protein; COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
  
  
 0.622
msrA
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
    0.622
C481_20861
Hypothetical protein; COG3425 3-hydroxy-3-methylglutaryl CoA synthase.
  
  
 0.622
C481_05500
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 
 0.586
C481_12974
Signal transduction protein with CBS domains; COG0517 FOG: CBS domain.
    
  0.578
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
Server load: low (16%) [HD]