STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_13239COG1817 Uncharacterized protein conserved in archaea. (365 aa)    
Predicted Functional Partners:
C481_13234
COG0438 Glycosyltransferase.
 
     0.735
C481_13129
Hypothetical protein.
 
     0.560
C481_11395
Hypothetical protein.
 
     0.552
C481_11415
Hypothetical protein.
 
     0.541
C481_11345
COG2348 Uncharacterized protein involved in methicillin resistance.
 
     0.527
C481_06721
COG0438 Glycosyltransferase.
  
     0.492
C481_05205
COG1033 Predicted exporters of the RND superfamily.
  
     0.488
C481_05680
Patched family protein; COG1033 Predicted exporters of the RND superfamily.
  
     0.466
C481_02342
Hypothetical protein; COG1196 Chromosome segregation ATPases.
  
     0.461
C481_20106
Hypothetical protein; COG0730 Predicted permeases.
  
     0.452
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.