Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_14548Integrase family protein; COG0582 Integrase. (195 aa)    
Predicted Functional Partners:
C481_02462
Hypothetical protein.
  
     0.614
C481_13539
COG3428 Predicted membrane protein.
  
     0.613
C481_02027
Terminal quinol oxidase subunit; COG2259 Predicted membrane protein.
  
     0.593
C481_13544
COG3428 Predicted membrane protein.
  
     0.593
C481_16010
Kinetochore-Ndc80 complex subunit Spc25; COG0419 ATPase involved in DNA repair.
  
     0.561
C481_15440
Bacterio-opsin activator HTH domain protein; COG3413 Predicted DNA binding protein.
  
     0.523
leuS-3
COG0495 Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.503
C481_06172
ArsR family transcriptional regulator; COG3398 Uncharacterized protein conserved in archaea.
  
     0.501
C481_00665
Hypothetical protein.
  
     0.499
C481_05645
Hypothetical protein.
  
     0.496
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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