Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C481_14768Methyl-viologen-reducing hydrogenase subunit delta; COG1148 Heterodisulfide reductase, subunit A and related polyferredoxins. (681 aa)    
Predicted Functional Partners:
glpC
Sn-glycerol-3-phosphate dehydrogenase subunit C; COG0247 Fe-S oxidoreductase.
  
 0.997
C481_14763
Molybdopterin oxidoreductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
 
 
 0.991
C481_14773
Anaerobic dehydrogenase-like protein; COG3381 Uncharacterized component of anaerobic dehydrogenases.
 
     0.986
C481_01400
Formate dehydrogenase subunit alpha; COG3383 Uncharacterized anaerobic dehydrogenase.
 
 
 0.975
C481_13734
Formate dehydrogenase subunit alpha; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
 
 
 0.975
C481_17835
Nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
   
 0.970
C481_19565
Hypothetical protein; COG0247 Fe-S oxidoreductase.
    
 0.956
C481_00940
COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
     
  0.862
C481_01802
COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
     
  0.862
C481_14758
4Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
  
 0.842
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
Server load: medium (48%) [HD]