Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_14948COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1. (525 aa)    
Predicted Functional Partners:
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.992
C481_09507
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
 0.991
C481_10157
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
 0.991
C481_10132
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 0.990
C481_12154
NADH-ubiquinone oxidoreductase chain 49kDa; COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 
 0.972
C481_14838
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 
 0.972
C481_01100
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
0.940
C481_09512
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
0.939
C481_12189
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
 
 0.934
C481_12144
COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A).
  
 
 0.924
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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