STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C481_16331COG1378 Predicted transcriptional regulators. (267 aa)    
Predicted Functional Partners:
C481_16326
COG1331 Highly conserved protein containing a thioredoxin domain.
       0.791
C481_04898
COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes.
   
    0.630
fxsA
COG3030 Protein affecting phage T7 exclusion by the F plasmid.
       0.546
C481_17777
(2R)-phospho-3-sulfolactate synthase ComA.
   
    0.535
C481_09302
Hypothetical protein; Involved in DNA damage repair.
  
     0.499
C481_08788
COG1378 Predicted transcriptional regulators.
  
   
 0.495
C481_06172
ArsR family transcriptional regulator; COG3398 Uncharacterized protein conserved in archaea.
  
     0.470
C481_04908
COG2404 Predicted phosphohydrolase (DHH superfamily).
  
     0.462
C481_08521
Hypothetical protein; COG1938 Archaeal enzymes of ATP-grasp superfamily.
  
     0.455
C481_14393
PBS lyase HEAT domain-containing protein; COG1413 FOG: HEAT repeat.
  
     0.455
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.