STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_16366DSBA oxidoreductase; COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis. (210 aa)    
Predicted Functional Partners:
C481_18990
Globin; COG2346 Truncated hemoglobins.
  
  
 0.718
C481_00370
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
 
    0.625
C481_02312
DSBA oxidoreductase; COG1651 Protein-disulfide isomerase.
  
 
 0.557
C481_02317
Formate/nitrite transporter; COG1651 Protein-disulfide isomerase.
  
 
 0.557
C481_11485
Formate/nitrite transporter; COG1651 Protein-disulfide isomerase.
  
 
 0.557
C481_14458
COG1651 Protein-disulfide isomerase.
  
 
 0.557
C481_20166
DSBA oxidoreductase; COG1651 Protein-disulfide isomerase.
  
 
 0.557
C481_18745
NADPH-dependent FMN reductase; COG0431 Predicted flavoprotein.
  
    0.555
C481_16361
DNA-directed RNA polymerase subunit epsilon.
       0.518
C481_01510
TrkA-N domain protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
   
   0.488
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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