STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_16602Haloacid dehalogenase; COG0546 Predicted phosphatases. (224 aa)    
Predicted Functional Partners:
C481_00330
FAD linked oxidase domain protein; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.805
rbcL
Ribulose bisophosphate carboxylase; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily.
     
 0.638
C481_06142
Phosphoglycolate phosphatase; Catalyzes the dephosphorylation of 2-phosphoglycolate.
    
  0.634
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
  
    0.597
C481_16597
Hypothetical protein.
       0.574
C481_02497
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; COG3010 Putative N-acetylmannosamine-6-phosphate epimerase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.566
C481_19745
HAD-superfamily hydrolase, subfamily IA, variant 3; COG0637 Predicted phosphatase/phosphohexomutase.
  
 
 0.558
C481_09377
COG0221 Inorganic pyrophosphatase.
   
 
  0.508
C481_02207
COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.505
C481_00875
COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
   
  0.464
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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