Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_16612Hypothetical protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs. (397 aa)    
Predicted Functional Partners:
C481_16617
Hypothetical protein.
  
 
 0.849
C481_18620
COG1100 GTPase SAR1 and related small G proteins.
   
 0.844
C481_12154
NADH-ubiquinone oxidoreductase chain 49kDa; COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 
 0.805
C481_14838
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 
 0.805
C481_08718
Rhomboid family protein; COG3582 Predicted nucleic acid binding protein containing the AN1-type Zn-finger.
   
 0.713
C481_13924
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
   
 0.713
dnaK
Molecular chaperone DnaK; Acts as a chaperone.
   
 0.688
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
  
 0.674
C481_09507
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
   
 
 0.674
C481_10157
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
   
 
 0.674
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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