STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_16772Hypothetical protein; COG1896 Predicted hydrolases of HD superfamily. (204 aa)    
Predicted Functional Partners:
surE
Stationary-phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.783
C481_15015
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
 
 
  0.777
tmk
COG0125 Thymidylate kinase.
  
 
  0.727
C481_07786
COG0295 Cytidine deaminase.
     
 0.722
C481_07776
COG2820 Uridine phosphorylase.
  
  
  0.662
C481_10475
Type 11 methyltransferase; COG2263 Predicted RNA methylase.
   
    0.652
C481_17657
COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
     
 0.645
C481_20201
Metallophosphoesterase; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases.
     
 0.645
C481_01110
Nuclease-like protein; COG1525 Micrococcal nuclease (thermonuclease) homologs.
  
  
  0.585
C481_03082
COG0647 Predicted sugar phosphatases of the HAD superfamily.
 
  
 0.530
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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