STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_17262COG2414 Aldehyde:ferredoxin oxidoreductase. (563 aa)    
Predicted Functional Partners:
C481_10660
4Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
 0.832
C481_07611
4Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
 0.831
C481_14758
4Fe-4S ferredoxin; COG0437 Fe-S-cluster-containing hydrogenase components 1.
  
 0.804
C481_06457
COG2998 ABC-type tungstate transport system, permease component.
 
   
 0.685
C481_15285
COG2414 Aldehyde:ferredoxin oxidoreductase.
  
  
 
0.677
C481_14733
COG2414 Aldehyde:ferredoxin oxidoreductase.
  
  
 
0.626
C481_05330
Molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; COG0303 Molybdopterin biosynthesis enzyme.
 
     0.589
C481_06452
Binding-protein-dependent transporters inner membrane component; COG4662 ABC-type tungstate transport system, periplasmic component.
 
   
 0.587
gap
COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase.
    
 0.587
pgk
COG0126 3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.572
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.