Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C481_17552Cupin; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain. (121 aa)    
Predicted Functional Partners:
C481_21236
Cupin; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
 0.526
C481_17532
COG1960 Acyl-CoA dehydrogenases.
    
  0.524
C481_17562
ABC transporter-related protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
       0.519
C481_07266
Silent information regulator protein Sir2; COG0846 NAD-dependent protein deacetylases, SIR2 family.
  
    0.516
C481_03572
COG0456 Acetyltransferases.
     
  0.499
C481_07031
N-acetyltransferase GCN5; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
     
  0.499
C481_17557
Transporter permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component.
       0.498
C481_17547
Hypothetical protein.
       0.474
C481_17542
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
       0.468
C481_17537
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
       0.466
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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