Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C481_17622Hypothetical protein. (90 aa)    
Predicted Functional Partners:
C481_04666
COG0607 Rhodanese-related sulfurtransferase.
   
 
  0.737
C481_19991
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
   
 
  0.737
C481_20206
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
   
 
  0.737
C481_19795
Branched-chain alpha-keto acid dehydrogenase subunit E2; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
 0.700
C481_08281
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.622
C481_12164
COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I).
  
 
  0.617
C481_12154
NADH-ubiquinone oxidoreductase chain 49kDa; COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
  
    0.555
C481_14838
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
  
    0.555
C481_17617
Hypothetical protein.
       0.547
C481_12769
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
    0.538
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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