Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_17895Pyrrolo-quinoline quinone; COG1520 FOG: WD40-like repeat. (538 aa)    
Predicted Functional Partners:
C481_18030
Pyrrolo-quinoline quinone; COG1520 FOG: WD40-like repeat.
  
     0.723
C481_17442
Pyrrolo-quinoline quinone; COG1520 FOG: WD40-like repeat.
  
     0.700
C481_05430
Pyrrolo-quinoline quinone; COG1520 FOG: WD40-like repeat.
  
     0.677
C481_08883
DNA methylase N-4/N-6 domain-containing protein; COG0863 DNA modification methylase.
  
     0.582
C481_05860
Hypothetical protein.
  
     0.568
C481_13199
Hypothetical protein.
  
     0.568
C481_18080
Hypothetical protein.
  
     0.558
taw2
Hypothetical protein; S-adenosyl-L-methionine-dependent transferase that acts as a component of the wyosine derivatives biosynthesis pathway. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S- adenosyl-L-methionine to 4-demethylwyosine (imG-14), forming 7- aminocarboxypropyl-demethylwyosine (wybutosine-86) at position 37 of tRNA(Phe).
 
     0.545
C481_13084
PAS/PAC sensor protein; COG2203 FOG: GAF domain.
  
     0.534
C481_11405
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
  
  0.516
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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