Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_18005COG0520 Selenocysteine lyase. (413 aa)    
Predicted Functional Partners:
C481_18020
NifU family SUF system FeS assembly protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
 0.986
C481_14363
FeS assembly ATPase SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.
 
  
 0.963
C481_14368
FeS assembly protein SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.943
C481_14373
SufBD protein; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 
 0.942
C481_20196
COG0520 Selenocysteine lyase.
  
  
 
0.907
C481_08963
COG3634 Alkyl hydroperoxide reductase, large subunit.
  
 
  0.891
C481_14109
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0492 Thioredoxin reductase.
  
 
  0.891
C481_08221
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COG0492 Thioredoxin reductase.
  
 
  0.877
C481_03212
COG0492 Thioredoxin reductase.
  
 
  0.850
C481_20226
COG0492 Thioredoxin reductase.
  
 
  0.850
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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