node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C481_08486 | C481_18560 | C481_08486 | C481_18560 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | Helicase c2; COG1199 Rad3-related DNA helicases. | 0.902 |
C481_08486 | C481_20401 | C481_08486 | C481_20401 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | Transcription factor; COG2101 TATA-box binding protein (TBP), component of TFIID and TFIIIB. | 0.924 |
C481_08486 | rpoD | C481_08486 | C481_06766 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.966 |
C481_08486 | rpoH | C481_08486 | C481_17397 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.970 |
C481_08486 | rpoK | C481_08486 | C481_06741 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | RNA polymerase Rpb6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.965 |
C481_08486 | rpoN | C481_08486 | C481_06746 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | DNA-directed RNA polymerase subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.963 |
C481_08486 | rpoP | C481_08486 | C481_14239 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.964 |
C481_08486 | tbp | C481_08486 | C481_19070 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | Transcription factor; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.924 |
C481_08486 | tfe | C481_08486 | C481_12604 | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | Transcription factor TFIIE subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation [...] | 0.980 |
C481_18560 | C481_08486 | C481_18560 | C481_08486 | Helicase c2; COG1199 Rad3-related DNA helicases. | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | 0.902 |
C481_18560 | C481_20401 | C481_18560 | C481_20401 | Helicase c2; COG1199 Rad3-related DNA helicases. | Transcription factor; COG2101 TATA-box binding protein (TBP), component of TFIID and TFIIIB. | 0.876 |
C481_18560 | rad25 | C481_18560 | C481_13164 | Helicase c2; COG1199 Rad3-related DNA helicases. | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | 0.915 |
C481_18560 | rpoD | C481_18560 | C481_06766 | Helicase c2; COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoD/eukaryotic RPB3 RNA polymerase subunit family. | 0.953 |
C481_18560 | rpoH | C481_18560 | C481_17397 | Helicase c2; COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.940 |
C481_18560 | rpoK | C481_18560 | C481_06741 | Helicase c2; COG1199 Rad3-related DNA helicases. | RNA polymerase Rpb6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.939 |
C481_18560 | rpoN | C481_18560 | C481_06746 | Helicase c2; COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase subunit N; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoN/eukaryotic RPB10 RNA polymerase subunit family. | 0.939 |
C481_18560 | rpoP | C481_18560 | C481_14239 | Helicase c2; COG1199 Rad3-related DNA helicases. | DNA-directed RNA polymerase subunit P; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoP/eukaryotic RPC10 RNA polymerase subunit family. | 0.940 |
C481_18560 | tbp | C481_18560 | C481_19070 | Helicase c2; COG1199 Rad3-related DNA helicases. | Transcription factor; General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation. | 0.873 |
C481_18560 | tfe | C481_18560 | C481_12604 | Helicase c2; COG1199 Rad3-related DNA helicases. | Transcription factor TFIIE subunit alpha; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation [...] | 0.943 |
C481_20401 | C481_08486 | C481_20401 | C481_08486 | Transcription factor; COG2101 TATA-box binding protein (TBP), component of TFIID and TFIIIB. | Type III restriction protein res subunit; COG1061 DNA or RNA helicases of superfamily II. | 0.924 |