Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C481_04848 | C481_05230 | C481_04848 | C481_05230 | Hypothetical protein. | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | 0.650 |
C481_04848 | C481_07876 | C481_04848 | C481_07876 | Hypothetical protein. | COG1745 Predicted metal-binding protein. | 0.471 |
C481_04848 | C481_15025 | C481_04848 | C481_15025 | Hypothetical protein. | Hypothetical protein; COG0640 Predicted transcriptional regulators. | 0.647 |
C481_04848 | C481_18310 | C481_04848 | C481_18310 | Hypothetical protein. | Hypothetical protein. | 0.673 |
C481_04848 | C481_21146 | C481_04848 | C481_21146 | Hypothetical protein. | Flagellin domain-containing protein. | 0.676 |
C481_04848 | cetZ-4 | C481_04848 | C481_19690 | Hypothetical protein. | Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family. | 0.708 |
C481_04848 | endA | C481_04848 | C481_19695 | Hypothetical protein. | tRNA splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.516 |
C481_04848 | rpl39e | C481_04848 | C481_18060 | Hypothetical protein. | COG2167 Ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. | 0.691 |
C481_04848 | secE | C481_04848 | C481_08753 | Hypothetical protein. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.713 |
C481_05230 | C481_04848 | C481_05230 | C481_04848 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | Hypothetical protein. | 0.650 |
C481_05230 | C481_07876 | C481_05230 | C481_07876 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | COG1745 Predicted metal-binding protein. | 0.577 |
C481_05230 | C481_18310 | C481_05230 | C481_18310 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | Hypothetical protein. | 0.536 |
C481_05230 | C481_21146 | C481_05230 | C481_21146 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | Flagellin domain-containing protein. | 0.530 |
C481_05230 | cetZ-4 | C481_05230 | C481_19690 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | Tubulin/FtsZ GTPase; Involved in cell shape control; Belongs to the CetZ family. | 0.666 |
C481_05230 | endA | C481_05230 | C481_19695 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | tRNA splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5' and 3' splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp. | 0.408 |
C481_05230 | rpl39e | C481_05230 | C481_18060 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | COG2167 Ribosomal protein L39E; Belongs to the eukaryotic ribosomal protein eL39 family. | 0.458 |
C481_05230 | secE | C481_05230 | C481_08753 | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.586 |
C481_07876 | C481_04848 | C481_07876 | C481_04848 | COG1745 Predicted metal-binding protein. | Hypothetical protein. | 0.471 |
C481_07876 | C481_05230 | C481_07876 | C481_05230 | COG1745 Predicted metal-binding protein. | Regulatory protein ArsR; COG0640 Predicted transcriptional regulators. | 0.577 |
C481_07876 | C481_15025 | C481_07876 | C481_15025 | COG1745 Predicted metal-binding protein. | Hypothetical protein; COG0640 Predicted transcriptional regulators. | 0.556 |
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