STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_19715Phosphate/phosphonate ABC transporter substrate-binding protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component. (305 aa)    
Predicted Functional Partners:
phnC
Phosphate/phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.995
C481_19705
COG3639 ABC-type phosphate/phosphonate transport system, permease component.
 
 
 0.975
C481_00390
ABC transporter-related protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
    
 0.670
C481_02782
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
    
 0.670
C481_12844
Putative signal-transducing histidine kinase / response regulator; COG0642 Signal transduction histidine kinase.
  
  
 0.574
C481_07536
PAS sensor protein; COG2202 FOG: PAS/PAC domain.
     
 0.537
C481_10052
PAS/PAC sensor protein; COG2202 FOG: PAS/PAC domain.
     
 0.537
C481_17407
Response regulator receiver modulated GAF sensor protein; COG0784 FOG: CheY-like receiver.
     
 0.537
C481_19720
Hypothetical protein; COG0645 Predicted kinase.
     
 0.497
C481_04051
Hypothetical protein.
  
     0.492
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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