Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
C481_19986SirA family protein; COG0425 Predicted redox protein, regulator of disulfide bond formation. (81 aa)    
Predicted Functional Partners:
C481_19981
Hypothetical protein.
 
 
 0.985
C481_20191
DsrE family protein; COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
  
 
 0.902
C481_19991
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
 
 
 0.839
C481_19996
Hypothetical protein; COG2391 Predicted transporter component.
  
  
 0.829
C481_20001
Hypothetical protein; COG2391 Predicted transporter component.
  
  
 0.814
C481_19976
Hypothetical protein.
       0.773
C481_05330
Molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; COG0303 Molybdopterin biosynthesis enzyme.
     
 0.710
C481_20206
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
 
 
 0.665
C481_04666
COG0607 Rhodanese-related sulfurtransferase.
 
 
 0.628
C481_19565
Hypothetical protein; COG0247 Fe-S oxidoreductase.
 
 
 0.589
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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