Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
C481_20136Electron transport protein SCO1/SenC; COG0191 Fructose/tagatose bisphosphate aldolase. (240 aa)    
Predicted Functional Partners:
C481_20126
COG0785 Cytochrome c biogenesis protein.
 
   
 0.922
C481_09507
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
 0.859
C481_20131
Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.853
C481_10157
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 0.839
C481_01100
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.829
C481_09512
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.829
C481_14099
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase.
    
 0.722
C481_14463
peptidyl-tRNA hydrolase.
     
 0.711
C481_20121
TrkA-C domain protein; COG0569 K+ transport systems, NAD-binding component.
       0.601
C481_12149
COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; Belongs to the complex I 20 kDa subunit family.
    
 
 0.599
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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