STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C481_20191DsrE family protein; COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction. (105 aa)    
Predicted Functional Partners:
C481_19986
SirA family protein; COG0425 Predicted redox protein, regulator of disulfide bond formation.
  
 
 0.932
C481_19240
SirA-like domain-containing protein; COG0425 Predicted redox protein, regulator of disulfide bond formation.
  
 
 0.908
C481_19981
Hypothetical protein.
    
  0.596
C481_20206
Rhodanese-like protein; COG0607 Rhodanese-related sulfurtransferase.
    
 0.504
C481_20196
COG0520 Selenocysteine lyase.
     
 0.462
C481_18780
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
 
  
 0.408
C481_03597
COG0607 Rhodanese-related sulfurtransferase.
 
  
 0.405
Your Current Organism:
Natrialba asiatica
NCBI taxonomy Id: 29540
Other names: N. asiatica DSM 12278, Natrialba asiatica 172P1, Natrialba asiatica DSM 12278, halophilic archaebacterium 172P1, halophilic archaeon 172P1, halophilic bacteria (strain 172P1), halophilic bacteria strain 172P1, halophilic bacterium (strain 172P1)
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