STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF1123Conserved hypothetical protein; Similar to gp:AE016945_34 [Bacteroides thetaiotaomicron VPI-5482], percent identity 81 in 221 aa, BLASTP E(): e-101. (221 aa)    
Predicted Functional Partners:
BF1124
Putative metalloendopeptidase; Similar to gp:AE016945_35 [Bacteroides thetaiotaomicron VPI-5482], percent identity 70 in 201 aa, BLASTP E(): 5e-77.
  
    0.856
BF1122
Conserved hypothetical protein; Similar to gp:AE016945_33 [Bacteroides thetaiotaomicron VPI-5482], percent identity 67 in 269 aa, BLASTP E(): e-105; Belongs to the multicopper oxidase YfiH/RL5 family.
  
    0.847
obg
GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.826
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.724
BF1119
Putative hypoxanthine guanine phosphoribosyltransferase; Similar to gp:AF048749_24 [Bacteroides fragilis NCTC9343], percent identity 100 in 178 aa, BLASTP E(): 8e-96; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.668
BF0726
Conserved hypothetical protein; Similar to gp:AE016935_52 [Bacteroides thetaiotaomicron VPI-5482], percent identity 77 in 137 aa, BLASTP E(): 3e-59.
  
     0.634
BF1087
Conserved hypothetical protein; Similar to gp:AE016945_26 [Bacteroides thetaiotaomicron VPI-5482], percent identity 74 in 354 aa, BLASTP E(): e-147.
 
     0.614
BF2228
Putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; Similar to gp:AE016929_14 [Bacteroides thetaiotaomicron VPI-5482], percent identity 76 in 122 aa, BLASTP E(): 2e-48.
  
     0.566
BF3327
Conserved hypothetical protein; Similar to gp:AE016933_32 [Bacteroides thetaiotaomicron VPI-5482], percent identity 59 in 389 aa, BLASTP E(): e-131.
 
     0.547
BF0511
Conserved hypothetical protein; Similar to gp:AE016942_5 [Bacteroides thetaiotaomicron VPI-5482], percent identity 77 in 136 aa, BLASTP E(): 5e-58.
  
    0.522
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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