Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BF1135 | BF1136 | Conserved hypothetical protein; Similar to gp:AE016945_57 [Bacteroides thetaiotaomicron VPI-5482], percent identity 33 in 145 aa, BLASTP E(): 2e-09. | Conserved hypothetical protein; Similar to gp:AE016945_58 [Bacteroides thetaiotaomicron VPI-5482], percent identity 59 in 140 aa, BLASTP E(): 1e-38. | 0.506 |
BF1135 | BF1137 | Conserved hypothetical protein; Similar to gp:AE016945_57 [Bacteroides thetaiotaomicron VPI-5482], percent identity 33 in 145 aa, BLASTP E(): 2e-09. | Putative decarboxylase beta subunit; Similar to gp:AE016945_59 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 404 aa, BLASTP E(): 0.0. | 0.489 |
BF1136 | BF1135 | Conserved hypothetical protein; Similar to gp:AE016945_58 [Bacteroides thetaiotaomicron VPI-5482], percent identity 59 in 140 aa, BLASTP E(): 1e-38. | Conserved hypothetical protein; Similar to gp:AE016945_57 [Bacteroides thetaiotaomicron VPI-5482], percent identity 33 in 145 aa, BLASTP E(): 2e-09. | 0.506 |
BF1136 | BF1137 | Conserved hypothetical protein; Similar to gp:AE016945_58 [Bacteroides thetaiotaomicron VPI-5482], percent identity 59 in 140 aa, BLASTP E(): 1e-38. | Putative decarboxylase beta subunit; Similar to gp:AE016945_59 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 404 aa, BLASTP E(): 0.0. | 0.850 |
BF1137 | BF1135 | Putative decarboxylase beta subunit; Similar to gp:AE016945_59 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 404 aa, BLASTP E(): 0.0. | Conserved hypothetical protein; Similar to gp:AE016945_57 [Bacteroides thetaiotaomicron VPI-5482], percent identity 33 in 145 aa, BLASTP E(): 2e-09. | 0.489 |
BF1137 | BF1136 | Putative decarboxylase beta subunit; Similar to gp:AE016945_59 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 404 aa, BLASTP E(): 0.0. | Conserved hypothetical protein; Similar to gp:AE016945_58 [Bacteroides thetaiotaomicron VPI-5482], percent identity 59 in 140 aa, BLASTP E(): 1e-38. | 0.850 |