Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BF1576 | BF1577 | Two-component system response regulator; Similar to gp:AE016932_14 [Bacteroides thetaiotaomicron VPI-5482], percent identity 93 in 229 aa, BLASTP E(): e-116. | Hypothetical protein. | 0.527 |
BF1576 | BF1578 | Two-component system response regulator; Similar to gp:AE016932_14 [Bacteroides thetaiotaomicron VPI-5482], percent identity 93 in 229 aa, BLASTP E(): e-116. | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | 0.735 |
BF1577 | BF1576 | Hypothetical protein. | Two-component system response regulator; Similar to gp:AE016932_14 [Bacteroides thetaiotaomicron VPI-5482], percent identity 93 in 229 aa, BLASTP E(): e-116. | 0.527 |
BF1577 | BF1578 | Hypothetical protein. | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | 0.773 |
BF1577 | BF1579 | Hypothetical protein. | Hypothetical protein. | 0.465 |
BF1577 | BF1580 | Hypothetical protein. | Hypothetical protein. | 0.465 |
BF1578 | BF1576 | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | Two-component system response regulator; Similar to gp:AE016932_14 [Bacteroides thetaiotaomicron VPI-5482], percent identity 93 in 229 aa, BLASTP E(): e-116. | 0.735 |
BF1578 | BF1577 | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | Hypothetical protein. | 0.773 |
BF1578 | BF1579 | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | Hypothetical protein. | 0.473 |
BF1578 | BF1580 | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | Hypothetical protein. | 0.473 |
BF1579 | BF1577 | Hypothetical protein. | Hypothetical protein. | 0.465 |
BF1579 | BF1578 | Hypothetical protein. | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | 0.473 |
BF1579 | BF1580 | Hypothetical protein. | Hypothetical protein. | 0.793 |
BF1580 | BF1577 | Hypothetical protein. | Hypothetical protein. | 0.465 |
BF1580 | BF1578 | Hypothetical protein. | Conserved hypothetical protein; Similar to gp:AE016932_13 [Bacteroides thetaiotaomicron VPI-5482], percent identity 88 in 397 aa, BLASTP E(): 0.0. | 0.473 |
BF1580 | BF1579 | Hypothetical protein. | Hypothetical protein. | 0.793 |