STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF3931Hypothetical protein. (50 aa)    
Predicted Functional Partners:
BF3932
single-stranded-DNA-specific exonuclease RecJ; Similar to gp:AE016942_212 [Bacteroides thetaiotaomicron VPI-5482], percent identity 93 in 572 aa, BLASTP E(): 0.0.
       0.773
BF3933
ATP-dependent DNA helicase RecQ; Similar to gp:AE016942_211 [Bacteroides thetaiotaomicron VPI-5482], percent identity 81 in 627 aa, BLASTP E(): 0.0.
       0.773
BF3934
Conserved hypothetical protein; Similar to gp:AE016942_210 [Bacteroides thetaiotaomicron VPI-5482], percent identity 75 in 319 aa, BLASTP E(): e-136.
       0.586
BF3930
DNA-3-methyladenine glycosylase I; Similar to gp:AE016935_247 [Bacteroides thetaiotaomicron VPI-5482], percent identity 92 in 190 aa, BLASTP E(): e-102.
       0.562
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.