STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF4254Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016938_194 [Bacteroides thetaiotaomicron VPI-5482], percent identity 34 in 1005 aa, BLASTP E(): e-156. (998 aa)    
Predicted Functional Partners:
BF4255
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016941_55 [Bacteroides thetaiotaomicron VPI-5482], percent identity 25 in 456 aa, BLASTP E(): 9e-18.
 
 
   0.947
BF3972
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016941_89 [Bacteroides thetaiotaomicron VPI-5482], percent identity 30 in 575 aa, BLASTP E(): 6e-50.
  
 
   0.805
BF0943
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016936_47 [Bacteroides thetaiotaomicron VPI-5482], percent identity 30 in 606 aa, BLASTP E(): 1e-54.
  
 
   0.804
BF3070
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016927_94 [Bacteroides thetaiotaomicron VPI-5482], percent identity 25 in 619 aa, BLASTP E(): 5e-35.
  
 
   0.802
BF0945
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016936_119 [Bacteroides thetaiotaomicron VPI-5482], percent identity 25 in 604 aa, BLASTP E(): 7e-28.
  
 
   0.801
BF0953
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016935_42 [Bacteroides thetaiotaomicron VPI-5482], percent identity 26 in 645 aa, BLASTP E(): 2e-28.
  
 
   0.791
BF4369
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016941_55 [Bacteroides thetaiotaomicron VPI-5482], percent identity 37 in 515 aa, BLASTP E(): 6e-70.
 
 
   0.782
BF0622
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016936_47 [Bacteroides thetaiotaomicron VPI-5482], percent identity 31 in 593 aa, BLASTP E(): 3e-55.
  
 
   0.774
BF1063
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016936_47 [Bacteroides thetaiotaomicron VPI-5482], percent identity 29 in 593 aa, BLASTP E(): 4e-46.
  
 
   0.773
BF4379
Putative outer membrane protein probably involved in nutrient binding; Similar to gp:AE016940_32 [Bacteroides thetaiotaomicron VPI-5482], percent identity 25 in 386 aa, BLASTP E(): 2e-13.
  
 
   0.773
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.