STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF4390Hypothetical protein. (241 aa)    
Predicted Functional Partners:
BF4389
Inositol-1-monophosphatase; Similar to gp:AE016937_141 [Bacteroides thetaiotaomicron VPI-5482], percent identity 78 in 266 aa, BLASTP E(): e-123; Belongs to the inositol monophosphatase superfamily.
       0.544
BF4388
Putative amidophosphoribosyl-transferase; Similar to gp:AE016937_140 [Bacteroides thetaiotaomicron VPI-5482], percent identity 69 in 227 aa, BLASTP E(): 1e-89.
       0.474
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.