STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BF4431Hypothetical protein. (1061 aa)    
Predicted Functional Partners:
BF4430
Hypothetical protein; Similar to gp:AE016930_86 [Bacteroides thetaiotaomicron VPI-5482], percent identity 28 in 417 aa, BLASTP E(): 1e-25.
      
0.658
BF4429
DNA binding protein HU family; Similar to gp:BTPBTOXIS_60 [Bacillus thuringiensis serovar israelensis], percent identity 52 in 82 aa, BLASTP E(): 4e-17; Belongs to the bacterial histone-like protein family.
       0.553
BF4432
Conserved hypothetical protein; Similar to gp:AE016930_81 [Bacteroides thetaiotaomicron VPI-5482], percent identity 24 in 323 aa, BLASTP E(): 1e-14.
       0.423
Your Current Organism:
Bacteroides fragilis
NCBI taxonomy Id: 295405
Other names: B. fragilis YCH46, Bacteroides fragilis YCH46, Bacteroides fragilis str. YCH46, Bacteroides fragilis strain YCH46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.