Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG42905.1 | APG42906.1 | A6070_01230 | A6070_01240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.485 |
| APG42905.1 | APG42907.1 | A6070_01230 | A6070_01245 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
| APG42905.1 | APG42908.1 | A6070_01230 | A6070_01250 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.483 |
| APG42905.1 | atpD | A6070_01230 | A6070_01235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.488 |
| APG42905.1 | fabH | A6070_01230 | A6070_01225 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.408 |
| APG42906.1 | APG42905.1 | A6070_01240 | A6070_01230 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.485 |
| APG42906.1 | APG42907.1 | A6070_01240 | A6070_01245 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
| APG42906.1 | APG42908.1 | A6070_01240 | A6070_01250 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.804 |
| APG42906.1 | atpD | A6070_01240 | A6070_01235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.998 |
| APG42907.1 | APG42905.1 | A6070_01245 | A6070_01230 | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.483 |
| APG42907.1 | APG42906.1 | A6070_01245 | A6070_01240 | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.951 |
| APG42907.1 | APG42908.1 | A6070_01245 | A6070_01250 | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.873 |
| APG42907.1 | atpD | A6070_01245 | A6070_01235 | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.850 |
| APG42908.1 | APG42905.1 | A6070_01250 | A6070_01230 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.483 |
| APG42908.1 | APG42906.1 | A6070_01250 | A6070_01240 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| APG42908.1 | APG42907.1 | A6070_01250 | A6070_01245 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.873 |
| APG42908.1 | atpD | A6070_01250 | A6070_01235 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.787 |
| atpD | APG42905.1 | A6070_01235 | A6070_01230 | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.488 |
| atpD | APG42906.1 | A6070_01235 | A6070_01240 | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| atpD | APG42907.1 | A6070_01235 | A6070_01245 | F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | F0F1 ATP synthase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.850 |
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