STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG43142.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (272 aa)    
Predicted Functional Partners:
APG43625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.772
APG45254.1
Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.703
APG44139.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.680
APG42898.1
Protein TolR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.635
APG43284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.635
APG43993.1
Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.635
APG43041.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.610
APG45052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.601
APG45152.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.601
APG42899.1
Tol-Pal system subunit TolQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.593
Your Current Organism:
Pelobacter acetylenicus
NCBI taxonomy Id: 29542
Other names: DSM 3246, NBRC 103808, P. acetylenicus, strain WoAcy 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.