Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APG42749.1 | APG43624.1 | A6070_00315 | A6070_05435 | Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.409 |
APG43624.1 | APG42749.1 | A6070_05435 | A6070_00315 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. | 0.409 |
APG43624.1 | APG43625.1 | A6070_05435 | A6070_05440 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
APG43624.1 | APG44159.1 | A6070_05435 | A6070_08605 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.455 |
APG43624.1 | APG44218.1 | A6070_05435 | A6070_08955 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.471 |
APG43624.1 | APG44346.1 | A6070_05435 | A6070_09675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
APG43624.1 | tolB | A6070_05435 | A6070_01180 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.803 |
APG43625.1 | APG43624.1 | A6070_05440 | A6070_05435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.913 |
APG44159.1 | APG43624.1 | A6070_08605 | A6070_05435 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.455 |
APG44159.1 | APG44346.1 | A6070_08605 | A6070_09675 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.927 |
APG44218.1 | APG43624.1 | A6070_08955 | A6070_05435 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.471 |
APG44218.1 | APG44346.1 | A6070_08955 | A6070_09675 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
APG44346.1 | APG43624.1 | A6070_09675 | A6070_05435 | Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.768 |
APG44346.1 | APG44159.1 | A6070_09675 | A6070_08605 | Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.927 |
APG44346.1 | APG44218.1 | A6070_09675 | A6070_08955 | Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.432 |
tolB | APG43624.1 | A6070_01180 | A6070_05435 | Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.803 |